This list will be periodically updated to include more examples.
Examples from the BMC Bioinformatics Paper
- Non-Linear Cycle Test (for testing speed/accuracy vs. system size)
- Large-Scale Reaction Network Benchmarks with #-# fast/continuous and slow reactions, respectively.
These examples were automatically generated by the included BenchMark maker (either the Matlab M-file or Fortran95 version).
- Bistable Biochemical Network with Futile Enzyme Cycle / Gene Expression / Positive Feedback